examples.pytest.test_detwin.test_truncate2

*** truncate.exam failed
>>>> CCIF signal CCIF_NOITEM (severity: Warning) <<<<
	(Raised in ccif_output_fmt)
Data name or category "_exptl_crystal.percent_solvent" not defined in dictionary
Not setting an output format string


>>>> CCIF signal CCIF_CXTRANGE (severity: SEVERE ERROR/FATAL) <<<<
	(Raised in ccif_get_value)
Context -1 out of range (must be between 0 and 20 inclusive)


unique.exam,unique-free-R,vecref.exam,vectors.exam,waterpeaks,watpeak.exam,watertidy-3shells,wilson.exam,hbond.exam,mat2symop.exam,symop2mat.exam,matthews_coef.exam,detwin.exam

*** detwin.exam failed
>>>> CCIF signal CCIF_NOITEM (severity: Warning) <<<<
	(Raised in ccif_output_fmt)
Data name or category "_exptl_crystal.percent_solvent" not defined in dictionary
Not setting an output format string


>>>> CCIF signal CCIF_CXTRANGE (severity: SEVERE ERROR/FATAL) <<<<
	(Raised in ccif_get_value)
Context -1 out of range (must be between 0 and 20 inclusive)

=================================== FAILURES ===================================
________________________________ test_truncate2 ________________________________

    def test_truncate2():
        import subprocess
        import os

        executableName = 'truncate'
        cexam = os.getenv('CEXAM')
        ccp4_scr = os.getenv('CCP4_SCR')

        assert cexam is not None
        assert ccp4_scr is not None
        assert os.path.exists(cexam)
        assert os.path.exists(ccp4_scr)

    #    curDir = os.getcwd()
    #    os.chdir(ccp4_scr)
        if not os.path.exists( ccp4_scr + os.sep + '1vr7_lr_dt.mtz'):
            test_detwin1()

        params = ''
        cmd = [executableName]
        cmd += ['hklin', ccp4_scr + os.sep + '1vr7_lr_dt.mtz']
        cmd += ['hklout', ccp4_scr + os.sep + '1vr7_lr_trunc.mtz']

        params += 'labin IMEAN=IMEAN_detw SIGIMEAN=SIGIMEAN_detw' + os.linesep
        params += 'nresidue 353' + os.linesep

        execProcess = subprocess.Popen(cmd, stdout=subprocess.PIPE, stdin=subprocess.PIPE)
        for param in params:
            execProcess.stdin.write(bytearray(param, 'utf-8'))
            execProcess.stdin.flush()
        execProcess.stdin.close()

        execSTDOUT = execProcess.stdout.readlines()
        execProcess.stdout.close()

    #    for line in execSTDOUT:
    # print line)

        exitCode = execProcess.wait()

    #    os.chdir(curDir)

>       assert exitCode == 0 # exit code reports success
E       assert 1 == 0

../examples/pytest/test_detwin.py:99: AssertionError